CDS

Accession Number TCMCG016C05891
gbkey CDS
Protein Id OMO93744.1
Location complement(join(44030..44356,44446..44508,44684..44789,44930..45024,45114..45143,45952..46023,46957..47016,47563..47609,48440..48504,48609..48697,48810..48848,48978..49037,49962..50034,50116..50300,51202..51282,52078..52209,52316..52416,53943..54066,55070..55214,55828..55981,57256..57329,58382..58514,58810..58920,59120..59147))
Organism Corchorus capsularis
locus_tag CCACVL1_06366

Protein

Length 797aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01008048.1
Definition putative Digestive organ expansion factor [Corchorus capsularis]
Locus_tag CCACVL1_06366

EGGNOG-MAPPER Annotation

COG_category L
Description U3 small nucleolar RNA-associated protein
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko03009        [VIEW IN KEGG]
KEGG_ko ko:K14774        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0000462        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006364        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016072        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0030490        [VIEW IN EMBL-EBI]
GO:0030515        [VIEW IN EMBL-EBI]
GO:0030684        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032040        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034511        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0042254        [VIEW IN EMBL-EBI]
GO:0042274        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGGAAAGCAATTCGGCTTGAAACGAGGATTGAAAAGGCACAAGACAGTTGCTAAGTTTGAGAGAAGAACTACAATTGCAAAAAAGAAAAAGGGTTTCAAAGATGAGGTTACTCGTAGCCCCTCGCCTACTTTATCAGGGGAACCATCTGGAGAAGAATCTAGTGGTGGTGCTCCTGAGCAAATAAATTATAAGGAGCCAACAATGTATGATAAGTTGTTGACAAAACTCAGGTCAAGTAACAAAACTGTTGCCGATGCATATGCAAAGAGACAAGTTGCAGAAGATGATGAAACTGATGGCACTGAATCACTTAGTGTGTCAGAGGAGGAGAATGGTGATGATGAAACTGATAATGACTCCCTTGGAATGCAAGGGCCTGAAATGGTTGGTACCGAAGAACTGACTGAAGATGCTGAAACTGAAGATGACTTAGAGACCTCTGACTCAGATCAAGATGATGACTTGAGTGTCCATGGTGCATCTGGGCTTGGAACCAGTTCATTTAAGAAGCATGTTGAATACAATTTGTCAAAAGAAGAGGCTGAAGATTTGTCAAAGAAGAAATGGAAATATACATGGGAGGTGCCTTCTGCTGACATATCGAATTGCAAGTGGGTAGGAACAGGAGAAGATTTTCTAAAGGAGGCTGACATGAATTCCAATTACGATCTGAAGCAAAAATTGTATAAACACTGGTTGGATGTCTATAGGAAATCCGGAGGCAATGACTTCCATTCATCTAGCCATAGATGGTTCTTCTCTCTTTGCAATAGTTATCGGGATATATTGCACTGTGAGAAGAAACCCTTCTATCACAAAGGTGTTGAAGAAGACTCTAATACTATGGATGGCTATCTTATGCATTCTCTCAATCACATATTCAAAACCAGAGATCTCATGAGAAAGAATGATGCAAAAATCAGCAAGCATCAAGAGAGTACGAAGGAGGAGATGCTTCCAGGTGATGGTCATCTTGATCAAGGGTTTACTCGTCCTAAGGTTTTGATCTTATTGCCCCTGAGAAGCATTGCACTTCGTGTCATTGAGAGATTAATACAACTAACTCCTGCATCTTCAAAGGTTAATGTGGAGCATCTTGACCGTTTTTATCAAGACTTTGGATCTGAAGAGACTGAAGGTGATGAGGAACAAGAGGAGCAATTAAAGAATGCTAAGGCTCAGAAGCCTCCGAAGCCTTCTGATCATCAATCACTTTTTAAGGGTGATACAAGGGATGACTTTATGATAGGCATTAAATTTACCAGGAAGACCATAAAGTTATATGGTGATTTCTATTCCTCAGACATCATTGTTGCTTCTCCTATTGAATTAATGACAAAATTTGGGAAGGCAGCAAAAAATAAGGAATTGGACACTGACTACCTCTCTTCTATAGAGGTTGTTATAATTGATCATGCAGATGTGATATCAATGCAGAATTGGAGTTTTCTGACTTCTGTTGTTGAGCATCTGAACCACATACCATCGAGACAGCTTGGAACTAATATCATGCGTATTAGGCAGTGGTATTTGGATGGATTTGCCAGATTTTATCGACAGACAATTATTTTAGGCTATTATTTAAACCCAGACATGAATGCTCTCTTCAATCACCATTGTGTTAATTATCACGGAAAGGTGAAGTCAGTGCAGGACCATAAAGGTGTTCTTCCTAAAGTTTTATCCCAAGTGCGGCAGATCTATGAAAGATTTGATGCAGATTCGATAGCTGATGTTGATGATGCTCGTCTTGAATATTTTGCTAAGAAGGTGTTTCCTAAGATAAAAGATTCCGAACAGGGTGGAATTATGATATTTGTCAGCTCATACTTTGAATTTGTTCGACTTCGAAATTTCTTGAAGTCTCAAAATGCATCCTTCTGTTTACTCGGGGATTACACAGATCAGGGAGACATATCTCGTGCACGGGATTGGTTTTTTAAAGGGAAACGAAAGATCATGCTGTACACAGAGAGGATTCATTTTTATCGCAGATATAAGATTCGCGGCATTCAGAATCTGATCATCTATTCTCTCCCAGAGAGAAAGGAGTTCTACCCTGAGATTGTCAATATGCTTGAAGGATCAGATGACATGGCATGCACCGTATTATTTTCTCTGTATGATAAGCTACGGGTAATGTATTGTGATCTTGTTATAGTTCAGTTTTGTAATATGGAAATGCATCCAGCATCTCTCCCCAATTGCTATATTGCAGTAGATTTTGTTGTGATGATGGTAGTGGAGGGTGATAATTGTGTAGGAGCCTTCTGCCATTCACCTGCTGAAAGCAGCAGTATTTGCCGCAATGGTATTGTTTTTAGTGTTTGGCAAAGATGTTTTGAGGTTTTTAAAACAGCACTAGCCCTATCAGCCTTAAATTATGTTTAA
Protein:  
MGKQFGLKRGLKRHKTVAKFERRTTIAKKKKGFKDEVTRSPSPTLSGEPSGEESSGGAPEQINYKEPTMYDKLLTKLRSSNKTVADAYAKRQVAEDDETDGTESLSVSEEENGDDETDNDSLGMQGPEMVGTEELTEDAETEDDLETSDSDQDDDLSVHGASGLGTSSFKKHVEYNLSKEEAEDLSKKKWKYTWEVPSADISNCKWVGTGEDFLKEADMNSNYDLKQKLYKHWLDVYRKSGGNDFHSSSHRWFFSLCNSYRDILHCEKKPFYHKGVEEDSNTMDGYLMHSLNHIFKTRDLMRKNDAKISKHQESTKEEMLPGDGHLDQGFTRPKVLILLPLRSIALRVIERLIQLTPASSKVNVEHLDRFYQDFGSEETEGDEEQEEQLKNAKAQKPPKPSDHQSLFKGDTRDDFMIGIKFTRKTIKLYGDFYSSDIIVASPIELMTKFGKAAKNKELDTDYLSSIEVVIIDHADVISMQNWSFLTSVVEHLNHIPSRQLGTNIMRIRQWYLDGFARFYRQTIILGYYLNPDMNALFNHHCVNYHGKVKSVQDHKGVLPKVLSQVRQIYERFDADSIADVDDARLEYFAKKVFPKIKDSEQGGIMIFVSSYFEFVRLRNFLKSQNASFCLLGDYTDQGDISRARDWFFKGKRKIMLYTERIHFYRRYKIRGIQNLIIYSLPERKEFYPEIVNMLEGSDDMACTVLFSLYDKLRVMYCDLVIVQFCNMEMHPASLPNCYIAVDFVVMMVVEGDNCVGAFCHSPAESSSICRNGIVFSVWQRCFEVFKTALALSALNYV